VMD-L Mailing List

From: Georcki Ropon (groponp_at_gmail.com)
Date: Wed Aug 11 2021 - 11:41:51 CDT

• Next message: Clement Fang Jin Koh: "Joining nonlinear chain fragments from LAMMPS data file"
• Previous message: Vermaas, Josh: "Re: Protein Alignment Question"
• In reply to: Seera Suryanarayana: "How to generate random velocities?"
• Messages sorted by: [ date ] [ thread ] [ subject ] [ author ] [ attachment ]

You can use reinivel for independent simulation

Geo.

Obtener Outlook para iOS<https://urldefense.com/v3/__https://aka.ms/o0ukef__;!!DZ3fjg!sDzrSqMofYy3NN6usQRM6je2p-BlXAXsZ3C0Ihsxl2ZOFKdFWdgCvYdN95JLAfDm7g$ >
________________________________
De: owner-vmd-l_at_ks.uiuc.edu <owner-vmd-l_at_ks.uiuc.edu> en nombre de Seera Suryanarayana <palusoori_at_gmail.com>
Enviado: Wednesday, August 11, 2021 4:57:19 AM
Para: vmd-l_at_ks.uiuc.edu <vmd-l_at_ks.uiuc.edu>
Asunto: vmd-l: How to generate random velocities?

Dear VMD users,
I was asked to do simulations five times with the same starting structure and number of processors. But the velocities should be different. Here my query is "How do you generate velocities in the gromacs?".

I know it is not a relevant forum to discuss this thing, but I am posting here hoping to get a solution.

Thanks in advance
Surya
Graduate student
India.

• Next message: Clement Fang Jin Koh: "Joining nonlinear chain fragments from LAMMPS data file"
• Previous message: Vermaas, Josh: "Re: Protein Alignment Question"
• In reply to: Seera Suryanarayana: "How to generate random velocities?"
• Messages sorted by: [ date ] [ thread ] [ subject ] [ author ] [ attachment ]