From: Giacomo Fiorin (giacomo.fiorin_at_gmail.com)
Date: Wed Jul 03 2019 - 13:32:12 CDT

Hi Monika, try one of the commands listed here:

https://www.ks.uiuc.edu/Research/vmd/vmd-1.9.3/ug/node194.html

On Wed, Jul 3, 2019 at 1:34 PM Monika Madhavi <monikamadhavi_at_gmail.com>
wrote:

> Dear all,
>
> Is there an inbuilt command in vmd to rotate a molecule, to make a given
> bond in the molecule, parallel to a given direction?
>
> Thanks
> Best regards,
> Monika
>

-- 
Giacomo Fiorin
Associate Professor of Research, Temple University, Philadelphia, PA
Research collaborator, National Institutes of Health, Bethesda, MD
http://goo.gl/Q3TBQU
https://github.com/giacomofiorin