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From: Aravind Ravichandran (raravind_at_ibab.ac.in)
Date: Wed Jun 27 2018 - 05:26:18 CDT
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Dear VMD users,
I am doing PCA analysis in VMD 1.9.3 (Linux version- I am using centos
7) using NMWIz extension, and using default parameters. I am able to
perform ANM and GNM calculation and I am getting the following error
only with PCA. I am not understanding what the error is about to solve
it. Can anyone help me with this?
@> Superposing [ 0%] 3s
@> Superposing [ 0%] 2s
@> Superposing [ 1%] 2s
..
@> Superposing [100%] 0s
while executing
"exec $::NMWiz::pybin $::NMWiz::prody {*}$args"
(procedure "::NMWiz::prodySubmitPCAjob" line 61)
invoked from within
"::NMWiz::prodySubmitPCAjob"
(procedure "::NMWiz::prodySubmitJob" line 26)
invoked from within
"::NMWiz::prodySubmitJob"
invoked from within
".nmwizprody.submitFrame.prodySubmit invoke"
("uplevel" body line 1)
invoked from within
"uplevel #0 [list $w invoke]"
(procedure "tk::ButtonUp" line 22)
invoked from within
"tk::ButtonUp .nmwizprody.submitFrame.prodySubmit"
(command bound to event)
I saw the same error being mentioned in the Prody GitHUb page, but
unanswered.
Thank you in advance for the reply.
Regards,
Aravind R
Junior Research Fellow,
Ranabir Das Lab,
National Centre for Biological sciences,
Banglore, India
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