From: Olaf Lenz (olenz_at_icp.uni-stuttgart.de)
Date: Fri Apr 15 2011 - 04:18:17 CDT

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On 04/15/2011 09:35 AM, alamng_at_uci.edu wrote:
> Dear Users,
>
> I need some help about my Replica Exchange script. I am using the material
> from the tutorial and it works nicely. However when I try to run in parallel
> (Choosing the proper choice) I got the following message:
>
> can't read "env(LSB_HOSTS)": no such variable
> while executing
> ""cd [pwd]; $namd_bin_dir/charmrun $namd_bin_dir/namd2 +netpoll" \
> $env(LSB_HOSTS) 1 "
> invoked from within
> "set spawn_namd_command \
> [list spawn_namd_parallel
> "cd [pwd]; $namd_bin_dir/charmrun $namd_bin_dir/namd2 +netpoll" \
> $env(LSB_HOSTS) 1 ]"
> (file "Replica_A21_A30_run1.config" line 56)
> invoked from within
> "source $file "
> ("foreach" body line 1)
> invoked from within
> "foreach file $argv { source $file }"
> (file "replica_exchange.tcl" line 6)
> /opt/torque/mom_priv/jobs/194654.greenplanet.local.SC: line 190: 187,1:
> command not found
>
> I cannot figure this out...Any suggestion?
>
> Thanks a lot.
> Alfonso Lam
>

-- 
Dr. rer. nat. Olaf Lenz
Institut für Computerphysik, Pfaffenwaldring 27, D-70569 Stuttgart
Phone: +49-711-685-63607