VMD-L Mailing List
From: Goutham (gouthambs_at_gmail.com)
Date: Mon Dec 14 2009 - 13:37:36 CST
- Next message: Ranyere Deyler: "solvating diferent regions in VMD"
- Previous message: Bogdan Costescu: "Re: Re: vmd 1.8.7 on Intel 64 bit: segmentation fault"
- Next in thread: Olaf Lenz: "Re: PBC + DCD wrap/unwrap"
- Reply: Olaf Lenz: "Re: PBC + DCD wrap/unwrap"
- Messages sorted by: [ date ] [ thread ] [ subject ] [ author ] [ attachment ]
Hey All,
I have a dcd file from a simulation for a protein with multiple chains. My
problem is that two protein chains are wrapped in two different cells. The
"pbc unwrap" doesn't work for me because the wrapping problem is there in
the first frame itself.
The pbc unwrap worked for other cases where the first frame did not have the
wrapping problem.
I thouth pbc join would be a solution. But pbc join doesn't recognize
options like -sel even in vmd 187.. Any pointers would be much appreciated.
Thanks
Goutham
- Next message: Ranyere Deyler: "solvating diferent regions in VMD"
- Previous message: Bogdan Costescu: "Re: Re: vmd 1.8.7 on Intel 64 bit: segmentation fault"
- Next in thread: Olaf Lenz: "Re: PBC + DCD wrap/unwrap"
- Reply: Olaf Lenz: "Re: PBC + DCD wrap/unwrap"
- Messages sorted by: [ date ] [ thread ] [ subject ] [ author ] [ attachment ]