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VMD (current) File List

Here is a list of all files with brief descriptions:
androidvmdstart.C [code]
androidvmdstart.h [code]
Animation.C [code]
Animation.h [code]
ArtDisplayDevice.C [code]
ArtDisplayDevice.h [code]
Atom.h [code]
AtomColor.C [code]
AtomColor.h [code]
AtomLexer.C [code]
AtomParser.C [code]
AtomParser.h [code]
AtomRep.C [code]
AtomRep.h [code]
AtomSel.C [code]
AtomSel.h [code]
Axes.C [code]
Axes.h [code]
BaseMolecule.C [code]
BaseMolecule.h [code]
Benchmark.C [code]
Benchmark.h [code]
BondSearch.C [code]
BondSearch.h [code]
CaveDisplayDevice.C [code]
CaveDisplayDevice.h [code]
CaveRoutines.C [code]
CaveRoutines.h [code]
CaveScene.C [code]
CaveScene.h [code]
cmd_animate.C [code]
cmd_collab.C [code]
cmd_color.C [code]
cmd_display.C [code]
cmd_imd.C [code]
cmd_label.C [code]
cmd_material.C [code]
cmd_menu.C [code]
cmd_mobile.C [code]
cmd_mol.C [code]
cmd_mouse.C [code]
cmd_parallel.C [code]
cmd_plugin.C [code]
cmd_profile.C [code]
cmd_render.C [code]
cmd_spaceball.C [code]
cmd_tool.C [code]
cmd_trans.C [code]
cmd_user.C [code]
cmd_util.C [code]
cmd_videostream.C [code]
cmd_vmdbench.C [code]
CmdAnimate.C [code]
CmdAnimate.h [code]
CmdColor.C [code]
CmdColor.h [code]
CmdDisplay.C [code]
CmdDisplay.h [code]
CmdIMD.C [code]
CmdIMD.h [code]
CmdLabel.C [code]
CmdLabel.h [code]
CmdMaterial.C [code]
CmdMaterial.h [code]
CmdMenu.C [code]
CmdMenu.h [code]
CmdMol.C [code]
CmdMol.h [code]
CmdPlugin.h [code]
CmdRender.C [code]
CmdRender.h [code]
CmdTrans.C [code]
CmdTrans.h [code]
ColorFltkMenu.C [code]
ColorFltkMenu.h [code]
ColorInfo.C [code]
colvar.C [code]
colvar.h [code]
colvar_UIestimator.h [code]
colvaratoms.C [code]
colvaratoms.h [code]
colvarbias.C [code]
colvarbias.h [code]
colvarbias_abf.C [code]
colvarbias_abf.h [code]
colvarbias_alb.C [code]
colvarbias_alb.h [code]
colvarbias_histogram.C [code]
colvarbias_histogram.h [code]
colvarbias_meta.C [code]
colvarbias_meta.h [code]
colvarbias_restraint.C [code]
colvarbias_restraint.h [code]
colvarcomp.C [code]
colvarcomp.h [code]
colvarcomp_angles.C [code]
colvarcomp_coordnums.C [code]
colvarcomp_distances.C [code]
colvarcomp_protein.C [code]
colvarcomp_rotations.C [code]
colvardeps.C [code]
colvardeps.h [code]
colvargrid.C [code]
colvargrid.h [code]
colvarmodule.C [code]
colvarmodule.h [code]
colvarparse.C [code]
colvarparse.h [code]
colvarproxy.C [code]
colvarproxy.h [code]
colvarproxy_vmd.C [code]
colvarproxy_vmd.h [code]
colvarproxy_vmd_version.h [code]
colvars_version.h [code]
colvarscript.C [code]
colvarscript.h [code]
colvartypes.C [code]
colvartypes.h [code]
colvarvalue.C [code]
colvarvalue.h [code]
Command.h [code]
CommandQueue.C [code]
CommandQueue.h [code]
CoorData.h [code]
CoorPluginData.C [code]
CoorPluginData.h [code]
CUDAAccel.C [code]
CUDAAccel.h [code] [code] [code] [code] [code] [code]
CUDAGaussianBlur.h [code]
CUDAKernels.h [code] [code]
CUDAMarchingCubes.h [code] [code]
CUDAMDFF.h [code] [code] [code] [code]
CUDAOrbital.h [code] [code]
CUDAParPrefixOps.h [code] [code]
CUDAQuickSurf.h [code] [code]
CUDASegmentation.h [code] [code]
CUDASort.h [code] [code]
CUDASpatialSearch.h [code] [code] [code] [code] [code]
CUDAWatershed.h [code] [code]
CUDAWrapNVML.h [code]
DepthSortObj.h [code]
DispCmds.C [code]
DispCmds.h [code]
Displayable.C [code]
Displayable.h [code]
DisplayDevice.C [code]
DisplayDevice.h [code]
DisplayFltkMenu.C [code]
DisplayFltkMenu.h [code]
DisplayRocker.C [code]
DisplayRocker.h [code]
DrawForce.C [code]
DrawForce.h [code]
DrawMolecule.C [code]
DrawMolecule.h [code]
DrawMolItem.C [code]
DrawMolItem.h [code]
DrawMolItem2.C [code]
DrawMolItemMSMS.C [code]
DrawMolItemNanoShaper.C [code]
DrawMolItemOrbital.C [code]
DrawMolItemQuickSurf.C [code]
DrawMolItemRibbons.C [code]
DrawMolItemRings.C [code]
DrawMolItemSurface.C [code]
DrawMolItemVolume.C [code]
DrawRingsUtils.C [code]
DrawRingsUtils.h [code]
FastPBC.C [code]
FastPBC.h [code]
FileChooserFltkMenu.C [code]
FileChooserFltkMenu.h [code]
FileRenderer.C [code]
FileRenderer.h [code]
FileRenderList.C [code]
FileRenderList.h [code]
fitrms.c [code]
fitrms.h [code]
FltkOpenGLDisplayDevice.C [code]
FltkOpenGLDisplayDevice.h [code]
FPS.C [code]
FPS.h [code]
Fragment.h [code]
frame_selector.C [code]
frame_selector.h [code]
FreeVRDisplayDevice.C [code]
FreeVRDisplayDevice.h [code]
FreeVRRoutines.C [code]
FreeVRRoutines.h [code]
FreeVRScene.C [code]
FreeVRScene.h [code]
GaussianBlur.C [code]
GaussianBlur.h [code]
GelatoDisplayDevice.C [code]
GelatoDisplayDevice.h [code]
GeometryAngle.C [code]
GeometryAngle.h [code]
GeometryAtom.C [code]
GeometryAtom.h [code]
GeometryBond.C [code]
GeometryBond.h [code]
GeometryDihedral.C [code]
GeometryDihedral.h [code]
GeometryFltkMenu.C [code]
GeometryFltkMenu.h [code]
GeometryList.C [code]
GeometryList.h [code]
GeometryMol.C [code]
GeometryMol.h [code]
GeometrySpring.C [code]
GeometrySpring.h [code]
glwin.c [code]
glwin.h [code]
GraphicsFltkMenu.C [code]
GraphicsFltkMenu.h [code]
GraphicsFltkReps.h [code]
hash.c [code]
hash.h [code]
Hershey.C [code]
Hershey.h [code]
HMDMgr.C [code]
HMDMgr.h [code]
ImageIO.C [code]
ImageIO.h [code]
imd.C [code]
imd.h [code]
IMDMgr.C [code]
IMDMgr.h [code]
IMDSim.C [code]
IMDSim.h [code]
IMDSimBlocking.C [code]
IMDSimBlocking.h [code]
IMDSimThread.C [code]
IMDSimThread.h [code]
Inform.C [code]
Inform.h [code]
inthash.c [code]
inthash.h [code]
intstack.c [code]
intstack.h [code]
Isocontour.C [code]
Isocontour.h [code]
Isosurface.C [code]
Isosurface.h [code]
JRegex.C [code]
JRegex.h [code]
JString.C [code]
JString.h [code]
LibGelatoDisplayDevice.C [code]
LibGelatoDisplayDevice.h [code]
LibTachyonDisplayDevice.C [code]
LibTachyonDisplayDevice.h [code]
macosxvmdstart.C [code]
macosxvmdstart.h [code]
MainFltkMenu.C [code]
MainFltkMenu.h [code]
MaterialFltkMenu.C [code]
MaterialFltkMenu.h [code]
MaterialList.C [code]
MaterialList.h [code]
Matrix4.C [code]
Matrix4.h [code]
MayaDisplayDevice.C [code]
MayaDisplayDevice.h [code]
MDFF.C [code]
MDFF.h [code]
Measure.C [code]
Measure.h [code]
MeasureCluster.C [code]
MeasurePBC.C [code]
MeasureQCP.C [code]
MeasureRDF.C [code]
MeasureSurface.C [code]
MeasureSymmetry.C [code]
MeasureSymmetry.h [code]
MeasureVolInterior.C [code]
MeasureVolInterior.h [code]
MobileButtons.C [code]
MobileButtons.h [code]
MobileInterface.C [code]
MobileInterface.h [code]
MobileTracker.C [code]
MobileTracker.h [code]
MolBrowser.C [code]
MolBrowser.h [code]
Molecule.C [code]
Molecule.h [code]
MoleculeGraphics.C [code]
MoleculeGraphics.h [code]
MoleculeList.C [code]
MoleculeList.h [code]
MolFilePlugin.C [code]
MolFilePlugin.h [code]
Mouse.C [code]
Mouse.h [code]
msmpot.c [code]
msmpot.h [code]Library interface file
msmpot_compute.c [code]
msmpot_cubic.c [code] [code]
msmpot_cuda.h [code] [code] [code]
msmpot_internal.h [code]
msmpot_setup.c [code]
MSMSInterface.C [code]
MSMSInterface.h [code]
NameList.h [code]
NanoShaperInterface.C [code]
NanoShaperInterface.h [code]
NVENCMgr.C [code]
NVENCMgr.h [code]
OpenCLKernels.h [code]
OpenCLOrbital.C [code]
OpenCLUtils.C [code]
OpenCLUtils.h [code]
OpenCLVolCPotential.C [code]
OpenGLCache.C [code]
OpenGLCache.h [code]
OpenGLDisplayDevice.C [code]
OpenGLDisplayDevice.h [code]
OpenGLExtensions.C [code]
OpenGLExtensions.h [code]
OpenGLPbufferDisplayDevice.C [code]
OpenGLPbufferDisplayDevice.h [code]
OpenGLRenderer.C [code]
OpenGLRenderer.h [code]
OpenGLShader.C [code]
OpenGLShader.h [code]
OpenGLStipples.h [code]
OptiXDisplayDevice.C [code]
OptiXDisplayDevice.h [code]
OptiXRenderer.C [code]
OptiXRenderer.h [code] [code]
OptiXShaders.h [code]
Orbital.C [code]
Orbital.h [code]
OrbitalJIT.C [code]
OrbitalJIT.h [code]
OSPRayDisplayDevice.C [code]
OSPRayDisplayDevice.h [code]
OSPRayRenderer.C [code]
OSPRayRenderer.h [code]
P_Buttons.C [code]
P_Buttons.h [code]
P_CaveButtons.C [code]
P_CaveButtons.h [code]
P_CaveTracker.C [code]
P_CaveTracker.h [code]
P_CmdTool.C [code]
P_CmdTool.h [code]
P_Feedback.h [code]
P_FreeVRButtons.C [code]
P_FreeVRButtons.h [code]
P_FreeVRTracker.C [code]
P_FreeVRTracker.h [code]
P_GrabTool.C [code]
P_GrabTool.h [code]
P_JoystickButtons.C [code]
P_JoystickButtons.h [code]
P_JoystickTool.C [code]
P_JoystickTool.h [code]
P_PinchTool.C [code]
P_PinchTool.h [code]
P_PrintTool.C [code]
P_PrintTool.h [code]
P_RotateTool.C [code]
P_RotateTool.h [code]
P_SensorConfig.C [code]
P_SensorConfig.h [code]
P_Tool.C [code]
P_Tool.h [code]
P_Tracker.C [code]
P_Tracker.h [code]
P_TugTool.C [code]
P_TugTool.h [code]
P_UIVR.C [code]
P_UIVR.h [code]
P_VRPNButtons.C [code]
P_VRPNButtons.h [code]
P_VRPNFeedback.C [code]
P_VRPNFeedback.h [code]
P_VRPNTracker.C [code]
P_VRPNTracker.h [code]
ParseTree.C [code]
ParseTree.h [code]
pcre.c [code]
pcre.h [code]
pcreinternal.h [code]
pcretables.h [code]
PeriodicTable.C [code]
PeriodicTable.h [code]
PhoneButtons.C [code]
PhoneButtons.h [code]
PhoneTracker.C [code]
PhoneTracker.h [code]
Pickable.h [code]
PickList.C [code]
PickList.h [code]
PickMode.h [code]
PickModeAddBond.C [code]
PickModeAddBond.h [code]
PickModeCenter.C [code]
PickModeCenter.h [code]
PickModeForce.C [code]
PickModeForce.h [code]
PickModeList.C [code]
PickModeList.h [code]
PickModeMolLabel.C [code]
PickModeMolLabel.h [code]
PickModeMove.C [code]
PickModeMove.h [code]
PickModeUser.C [code]
PickModeUser.h [code]
PlainTextInterp.C [code]
PlainTextInterp.h [code]
PluginMgr.C [code]
PluginMgr.h [code]
POV3DisplayDevice.C [code]
POV3DisplayDevice.h [code]
ProfileHooks.h [code]
PSDisplayDevice.C [code]
PSDisplayDevice.h [code]
ptrstack.c [code]
ptrstack.h [code]
py_animate.C [code]
py_atomsel.C [code]
py_axes.C [code]
py_color.C [code]
py_commands.C [code]
py_commands.h [code]
py_display.C [code]
py_graphics.C [code]
py_imd.C [code]
py_label.C [code]
py_material.C [code]
py_measure.C [code]
py_menu.C [code]
py_molecule.C [code]
py_molrep.C [code]
py_mouse.C [code]
py_numeric.C [code]
py_render.C [code]
py_selection.C [code]
py_topo.C [code]
py_trans.C [code]
py_vmd.C [code]
PythonTextInterp.C [code]
PythonTextInterp.h [code]
QMData.C [code]
QMData.h [code]
QMTimestep.C [code]
QMTimestep.h [code]
QuickSurf.C [code]
QuickSurf.h [code]
R3dDisplayDevice.C [code]
R3dDisplayDevice.h [code]
RadianceDisplayDevice.C [code]
RadianceDisplayDevice.h [code]
RayShadeDisplayDevice.C [code]
RayShadeDisplayDevice.h [code]
RenderFltkMenu.C [code]
RenderFltkMenu.h [code]
RenderManDisplayDevice.C [code]
RenderManDisplayDevice.h [code]
Residue.h [code]
ResizeArray.h [code]
SaveTrajectoryFltkMenu.C [code]
SaveTrajectoryFltkMenu.h [code]
ScaleSpaceFilter.C [code]
ScaleSpaceFilter.h [code]
Scene.C [code]
Scene.h [code]
SDLOpenGLDisplayDevice.C [code]
Segmentation.C [code]
Segmentation.h [code]
SelectionBuilder.C [code]
SelectionBuilder.h [code]
SmallRing.h [code]
SmallRingLinkages.h [code]
SnapshotDisplayDevice.C [code]
SnapshotDisplayDevice.h [code]
SortableArray.h [code]
Spaceball.C [code]
Spaceball.h [code]
SpaceballButtons.C [code]
SpaceballButtons.h [code]
SpaceballTracker.C [code]
SpaceballTracker.h [code]
SpatialSearch.C [code]
SpatialSearch.h [code]
SpringTool.C [code]
SpringTool.h [code]
Stack.h [code]
Stage.C [code]
Stage.h [code]
STLDisplayDevice.C [code]
STLDisplayDevice.h [code]
Stride.C [code]
Stride.h [code]
Surf.C [code]
Surf.h [code]
SymbolTable.C [code]
SymbolTable.h [code]
TachyonDisplayDevice.C [code]
TachyonDisplayDevice.h [code]
tcl_commands.C [code]
tcl_commands.h [code]
TclCommands.C [code]
TclCommands.h [code]
TclFastPBC.C [code]
TclGraphics.C [code]
TclMDFF.C [code]
TclMDFF.h [code]
TclMeasure.C [code]
TclMolInfo.C [code]
TclSegmentation.C [code]
TclTextInterp.C [code]
TclTextInterp.h [code]
TclVec.C [code]
TclVolMap.C [code]
TclVoltool.C [code]
TextEvent.h [code]
TextInterp.h [code]
Timestep.C [code]
Timestep.h [code]
ToolFltkMenu.C [code]
ToolFltkMenu.h [code]
UIObject.C [code]
UIObject.h [code]
UIText.C [code]
UIText.h [code]
util_simd.C [code]
utilities.C [code]
utilities.h [code]
VideoStream.C [code]
VideoStream.h [code]
vmd.C [code]
vmd.frag [code]
vmd.h [code]
vmd.vert [code]
VMDApp.C [code]
VMDApp.h [code]
VMDCollab.C [code]
VMDCollab.h [code]
vmdconsole.c [code]
vmdconsole.h [code]
VMDDir.C [code]
VMDDir.h [code]
VMDDisplayList.C [code]
VMDDisplayList.h [code]
vmddlopen.c [code]
vmddlopen.h [code]
VMDFltkMenu.C [code]
VMDFltkMenu.h [code]
vmdfsinfo.c [code]
vmdfsinfo.h [code]
vmdmain.C [code]
VMDMenu.C [code]
VMDMenu.h [code]
VMDMPI.C [code]
VMDMPI.h [code]
VMDQuat.C [code]
VMDQuat.h [code]
vmdsock.c [code]
vmdsock.h [code]
vmdsphere.frag [code]
vmdsphere.vert [code]
vmdspheresprite.frag [code]
vmdspheresprite.vert [code]
VMDThreads.C [code]
VMDThreads.h [code]
VMDTitle.C [code]
VMDTitle.h [code]
VMDTkinterMenu.C [code]
VMDTkinterMenu.h [code]
VMDTkMenu.C [code]
VMDTkMenu.h [code]
VolCPotential.C [code]
VolCPotential.h [code]
VolMapCreate.C [code]
VolMapCreate.h [code]
VolMapCreateILS.C [code]
Voltool.C [code]
Voltool.h [code]
VolumeTexture.C [code]
VolumeTexture.h [code]
VolumetricData.C [code]
VolumetricData.h [code]
VRJugglerApp.C [code]
VRJugglerApp.h [code]
VRJugglerButtons.C [code]
VRJugglerButtons.h [code]
VRJugglerDisplayDevice.C [code]
VRJugglerDisplayDevice.h [code]
VRJugglerRoutines.C [code]
VRJugglerRoutines.h [code]
VRJugglerScene.C [code]
VRJugglerScene.h [code]
VRJugglerSharedData.C [code]
VRJugglerSharedData.h [code]
VRJugglerTracker.C [code]
VRJugglerTracker.h [code]
Vrml2DisplayDevice.C [code]
Vrml2DisplayDevice.h [code]
VrmlDisplayDevice.C [code]
VrmlDisplayDevice.h [code]
Watershed.C [code]
Watershed.h [code]
WavefrontDisplayDevice.C [code]
WavefrontDisplayDevice.h [code]
Win32ftp.C [code]
Win32ftp.h [code]
Win32Joystick.C [code]
Win32Joystick.h [code]
Win32OpenGLDisplayDevice.C [code]
win32vmdstart.c [code]
win32vmdstart.h [code]
WKFThreads.C [code]
WKFThreads.h [code]
WKFUtils.C [code]
WKFUtils.h [code]
X3DDisplayDevice.C [code]
X3DDisplayDevice.h [code] [code]

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