RE: Parameters for HS(CH2)11NH2

From: Deng, Jinxia (Nancy) (
Date: Sun May 22 2016 - 14:03:37 CDT

Try cgenFF to get charm parameters

From: Natnael Doilicho []
Sent: Friday, May 20, 2016 8:07 PM
To: Namd Mailing List
Subject: namd-l: Parameters for HS(CH2)11NH2

Hi All,

I'm looking for CHARMM-compatible forcefield parameters for the molecule HS(CH2)11NH2, a sulfur attached to a longish alkane chain terminated by NH2.

Does anyone know where I can find such parameters or perhaps similar parameters that analogize closely, like de-protinated L-Lysine?


Natnael B. Doilicho

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