Re: Grid forces visualisation

From: Jeff Comer (
Date: Wed Feb 11 2015 - 08:16:41 CST


The grid force energy is added to the MISC column in the output. You can
visualize dx files in VMD.


On Wednesday, February 11, 2015, Charan Thota <> wrote:

> Hi,
> I am working on Grid steered molecular dynamics using an octane system. It
> has a set of 256 octane molecules with sulphur on one end. I used grid
> forces to mimic a gold surface on the sulphur side.
> My questions are :
> Is there any possibility to make sure that the grid is actually present?
> If yes, How do we visualise it?
> Thanks & Regards,
> Charan.

Jeffrey Comer, PhD
Assistant Professor
Institute of Computational Comparative Medicine
Nanotechnology Innovation Center of Kansas State
Kansas State University
Office: P-213 Mosier Hall
Phone: 785-532-6311

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