Here is a list of all file members with links to the files they belong to:
- n -
- N_ANGSTROM
: ParseOptions.h
- N_EV
: ParseOptions.h
- N_FSEC
: ParseOptions.h
- N_HOUR
: ParseOptions.h
- N_KCAL
: ParseOptions.h
- N_KELVIN
: ParseOptions.h
- N_KJOULE
: ParseOptions.h
- N_METER
: ParseOptions.h
- N_MIN
: ParseOptions.h
- N_NANOMETER
: ParseOptions.h
- N_NSEC
: ParseOptions.h
- N_SEC
: ParseOptions.h
- N_UNIT
: ParseOptions.h
- N_UNITS_UNDEFINED
: ParseOptions.h
- NAIVE
: SimParameters.h
- NAMD_backup_file()
: common.C
, common.h
- NAMD_blank_string()
: strlib.C
, strlib.h
- NAMD_bug()
: common.C
, common.h
- namd_build_date
: main.C
- namd_build_machine
: main.C
- namd_build_user
: main.C
- NAMD_close
: Output.C
, common.C
, common.h
, Output.C
- NAMD_ComputeNonbonded_SortAtoms
: common.h
- NAMD_ComputeNonbonded_SortAtoms_LessBranches
: common.h
- NAMD_die()
: common.h
, ComputePmeCUDAKernel.cu
, CudaComputeNonbondedKernel.cu
, CudaTileListKernel.cu
, TestArray.h
, common.C
- NAMD_err()
: common.C
, common.h
- NAMD_EVENT_RANGE
: NamdEventsProfiling.h
- NAMD_EVENT_RANGE_2
: NamdEventsProfiling.h
- NAMD_EVENT_START
: NamdEventsProfiling.h
- NAMD_EVENT_START_EX
: NamdEventsProfiling.h
- NAMD_EVENT_STOP
: NamdEventsProfiling.h
- NAMD_file_exists()
: common.C
, common.h
- NAMD_FILENAME_BUFFER_SIZE
: common.h
- NAMD_find_first_word()
: strlib.C
, strlib.h
- NAMD_find_word()
: strlib.C
, strlib.h
- NAMD_new_handler()
: BackEnd.C
- NAMD_open
: Output.C
- NAMD_open_text()
: common.C
, common.h
- NAMD_pad()
: strlib.C
, strlib.h
- NAMD_PROFILE_EVENT
: NamdEventsProfiling.h
- NAMD_PROFILE_START
: NamdEventsProfiling.h
- NAMD_PROFILE_STOP
: NamdEventsProfiling.h
- NAMD_quit()
: common.h
, common.C
- NAMD_read_int()
: strlib.C
, strlib.h
- NAMD_read_line()
: strlib.C
, strlib.h
- namd_reciprocal
: Vector.h
- NAMD_REGISTER_EVENT
: NamdEventsProfiling.h
- NAMD_remove_comment()
: strlib.C
, strlib.h
- namd_rsqrt
: Vector.h
- NAMD_seek()
: dcdlib.C
, dcdlib.h
- NAMD_SeparateWaters
: common.h
- namd_sighandler_t
: Controller.C
- NAMD_stringdup()
: common.C
, common.h
- NAMD_truncate()
: strlib.C
, strlib.h
- NAMD_VERSION_NUMBER
: colvarproxy_namd.h
- NAMD_write
: dcdlib.C
, Output.C
, common.C
, common.h
, dcdlib.C
, Output.C
- namdMyNode
: Output.C
- namdnearbyint
: common.h
- NamdProfileEventStr
: NamdEventsProfiling.h
- NAME
: ComputeNonbondedBase.h
, ComputeNonbondedCUDAKernelBase.h
- NAMESIZE
: GromacsTopFile.h
- nblocks
: ComputePmeCUDAKernel.cu
- NBPAIR
: ComputeNonbondedInl.h
- NBSELF
: ComputeNonbondedInl.h
- NbtholePairValue
: Parameters.h
- NBTYPE
: ComputeNonbondedFEP.C
, ComputeNonbondedGo.C
, ComputeNonbondedLES.C
, ComputeNonbondedPProf.C
, ComputeNonbondedStd.C
, ComputeNonbondedTabEnergies.C
, ComputeNonbondedTI.C
- NBWORKARRAY
: ComputeNonbondedUtil.h
- NBWORKARRAYSINIT
: ComputeNonbondedUtil.h
- NEGATIVE
: ParseOptions.h
- NELEMS
: msm_defn.h
- new_array()
: packmsg.h
- new_PDBData()
: PDBData.C
, PDBData.h
- newhandle_msg()
: ScriptTcl.C
- newhandle_msg_ex()
: ScriptTcl.C
- next()
: ParseOptions.C
- NFILE_POS
: dcdlib.C
- NL_Msm
: msm.h
- NL_MSM_ALL_FLAGS
: msm.h
- NL_msm_approx()
: msm.c
, msm.h
- NL_MSM_APPROX_BSPLINE
: msm.h
- NL_MSM_APPROX_CUBIC
: msm.h
- NL_MSM_APPROX_END
: msm.h
- NL_msm_approx_name()
: msm.c
, msm.h
- NL_MSM_APPROX_NONIC
: msm.h
- NL_MSM_APPROX_NONIC4
: msm.h
- NL_MSM_APPROX_QUINTIC
: msm.h
- NL_MSM_APPROX_QUINTIC2
: msm.h
- NL_MSM_APPROX_SEPTIC
: msm.h
- NL_MSM_APPROX_SEPTIC3
: msm.h
- NL_msm_cleanup()
: msm_setup.c
, msm_defn.h
- NL_MSM_COMPUTE_1AWAY
: msm.h
- NL_MSM_COMPUTE_ALL
: msm.h
- NL_MSM_COMPUTE_CUDA
: msm.h
- NL_MSM_COMPUTE_CUDA_FALL_BACK
: msm.h
- NL_MSM_COMPUTE_CUDA_GRID_CUTOFF
: msm.h
- NL_MSM_COMPUTE_CUDA_SHORT_RANGE
: msm.h
- NL_msm_compute_force()
: msm.h
, msm.c
- NL_msm_compute_force_sprec()
: msm.c
, msm.h
- NL_msm_compute_long_range()
: msm_longrng.c
- NL_MSM_COMPUTE_LONG_RANGE
: msm.h
- NL_msm_compute_long_range()
: msm_defn.h
- NL_msm_compute_long_range_sprec()
: msm_defn.h
, msm_longrng_sprec.c
- NL_MSM_COMPUTE_NONFACTORED
: msm.h
- NL_msm_compute_short_range()
: msm_defn.h
, msm_shortrng.c
- NL_MSM_COMPUTE_SHORT_RANGE
: msm.h
- NL_msm_compute_short_range_sprec()
: msm_defn.h
, msm_shortrng_sprec.c
- NL_MSM_COMPUTE_SPREC
: msm.h
- NL_msm_configure()
: msm.h
, msm.c
- NL_msm_create()
: msm.c
, msm.h
- NL_msm_destroy()
: msm.h
, msm.c
- NL_MSM_ERROR_CUDA
: msm.h
- NL_MSM_ERROR_END
: msm.h
- NL_MSM_ERROR_MALLOC
: msm.h
- NL_MSM_ERROR_PARAM
: msm.h
- NL_MSM_ERROR_RANGE
: msm.h
- NL_MSM_ERROR_SUPPORT
: msm.h
- NL_MSM_PERIODIC_ALL
: msm.h
- NL_MSM_PERIODIC_NONE
: msm.h
- NL_MSM_PERIODIC_VEC1
: msm.h
- NL_MSM_PERIODIC_VEC2
: msm.h
- NL_MSM_PERIODIC_VEC3
: msm.h
- NL_MSM_REPORT_TIMINGS
: msm.h
- NL_msm_setup()
: msm.h
, msm_setup.c
- NL_msm_split()
: msm.h
, msm.c
- NL_MSM_SPLIT_END
: msm.h
- NL_msm_split_name()
: msm.c
, msm.h
- NL_MSM_SPLIT_SIGMA2_3
: msm.h
- NL_MSM_SPLIT_SIGMA2_6
: msm.h
- NL_MSM_SPLIT_SIGMA3_5
: msm.h
- NL_MSM_SPLIT_SIGMA4_6
: msm.h
- NL_MSM_SPLIT_SIGMA4_7
: msm.h
- NL_MSM_SPLIT_SIGMA5_8
: msm.h
- NL_MSM_SPLIT_SIGMA5_9
: msm.h
- NL_MSM_SPLIT_SIGMA6_10
: msm.h
- NL_MSM_SPLIT_SIGMA6_11
: msm.h
- NL_MSM_SPLIT_SIGMA6_9
: msm.h
- NL_MSM_SPLIT_SIGMA7_11
: msm.h
- NL_MSM_SPLIT_SIGMA7_12
: msm.h
- NL_MSM_SPLIT_SIGMA7_13
: msm.h
- NL_MSM_SPLIT_SIGMA8_12
: msm.h
- NL_MSM_SPLIT_SIGMA8_13
: msm.h
- NL_MSM_SPLIT_SIGMA8_14
: msm.h
- NL_MSM_SPLIT_SIGMA8_15
: msm.h
- NL_MSM_SPLIT_SWITCH1_2
: msm.h
- NL_MSM_SPLIT_SWITCH3_4
: msm.h
- NL_MSM_SPLIT_SWITCH7_8
: msm.h
- NL_MSM_SPLIT_TAYLOR1
: msm.h
- NL_MSM_SPLIT_TAYLOR2
: msm.h
- NL_MSM_SPLIT_TAYLOR3
: msm.h
- NL_MSM_SPLIT_TAYLOR4
: msm.h
- NL_MSM_SPLIT_TAYLOR5
: msm.h
- NL_MSM_SPLIT_TAYLOR6
: msm.h
- NL_MSM_SPLIT_TAYLOR7
: msm.h
- NL_MSM_SPLIT_TAYLOR8
: msm.h
- NL_MSM_SUCCESS
: msm.h
- NO
: common.h
- node_molecule
: Node.C
- node_parameters
: Node.C
- node_simParameters
: Node.C
- NodeID
: NamdTypes.h
- NodeIDList
: NamdTypes.h
- NOENERGY
: ComputeNonbondedBase.h
- NOFAST
: ComputeNonbondedBase.h
- NOFULL
: ComputeNonbondedBase.h
- noInterNode()
: ProxyMgr.C
- NOKNL
: ComputeNonbondedBase.h
- NONBOND
: GromacsTopFile.C
- NONBONDED_OR_SELF_TYPE
: LdbCoordinator.h
- NONBONDEDTABLES
: ComputeBondedCUDAKernel.cu
- NONBONDKERNEL_NUM_WARP
: CudaComputeNonbondedKernel.cu
- NONE
: SimParameters.h
- NORMAL
: ComputeNonbondedBase.h
- normalize3d()
: fitrms.C
- NOSHORT
: ComputeNonbondedBase.h
- NOT_ALCHPAIR
: ComputeNonbondedBase.h
- NOT_NEGATIVE
: ParseOptions.h
- NOT_POSITIVE
: ParseOptions.h
- NOTABENERGY
: ComputeNonbondedBase.h
- notUsed
: AtomMap.h
- NPRIV_POS
: dcdlib.C
- NSAVC_POS
: dcdlib.C
- Nstencil
: msm_longrng.c
, msm_longrng_sprec.c
- NSTEP_POS
: dcdlib.C
- NTH_ELEMENT
: SortAtoms.C
- num_atoms
: ComputeNonbondedCUDA.C
, ComputeNonbondedCUDAKernel.cu
- num_local_atoms
: ComputeNonbondedCUDA.C
- num_patches
: ComputeNonbondedCUDAKernel.cu
- num_remote_atoms
: ComputeNonbondedCUDA.C
- NUM_STREAMS
: ComputePme.C
- num_virials
: ComputeNonbondedCUDA.C
, ComputeNonbondedCUDAKernel.cu
- NUM_WARP
: ComputeNonbondedCUDAKernel.h
- numatoms
: ScriptTcl.C
- numExclusion
: GromacsTopFile.C
- numGaussPair
: GromacsTopFile.C
- numLJPair
: GromacsTopFile.C
- numPatches
: CudaComputeNonbondedKernel.cu
- numTileLists
: CudaComputeNonbondedKernel.cu
- numTileListsDst
: CudaTileListKernel.cu
- numTileListsSrc
: CudaTileListKernel.cu