_hasNewAtoms | Patch | protected |
atomMapper | Patch | protected |
avgPositionBox | Patch | protected |
avgPositionBoxClosed(void) | Patch | |
avgPositionComputeList | Patch | protected |
avgPositionPtrBegin | Patch | protected |
avgPositionPtrEnd | Patch | protected |
bornRad | Patch | protected |
bornRadBox | Patch | protected |
bornRadBoxClosed(void) | Patch | |
bornRadComputeList | Patch | protected |
boxClosed(int) | ProxyPatch | protectedvirtual |
boxesOpen | Patch | protected |
child | Patch | protected |
computesSortedByPriority | Patch | protected |
cudaAtomPtr | Patch | protected |
dEdaSum | Patch | protected |
dEdaSumBox | Patch | protected |
dEdaSumBoxClosed(void) | Patch | |
dEdaSumComputeList | Patch | protected |
depositCombinedResultMsg(ProxyCombinedResultMsg *) | ProxyPatch | |
depositCombinedResultRawMsg(ProxyCombinedResultRawMsg *) | ProxyPatch | |
dHdrPrefix | Patch | protected |
dHdrPrefixBox | Patch | protected |
dHdrPrefixBoxClosed(void) | Patch | |
dHdrPrefixComputeList | Patch | protected |
f | Patch | protected |
firstHoldableCompute | Patch | protected |
flags | Patch | |
forceBox | Patch | protected |
forceBoxClosed(void) | Patch | |
forceComputeList | Patch | protected |
gbisP2Ready() | Patch | |
gbisP3Ready() | Patch | |
getCompAtomExtInfo() | Patch | inline |
getCompAtomInfo() | Patch | inline |
getCudaAtomList() | Patch | inline |
getNumAtoms() const | Patch | inline |
getNumComputes() const | Patch | inline |
getNumFixedAtoms() const | Patch | inline |
getPatchID() const | Patch | inline |
getSpanningTreeChild(int *) | ProxyPatch | |
getSpanningTreeChildPtr() | ProxyPatch | inline |
getSpanningTreeNChild(void) | ProxyPatch | inline |
getSpanningTreeParent() | ProxyPatch | inline |
hasNewAtoms() | Patch | inline |
intRad | Patch | protected |
intRadBox | Patch | protected |
intRadBoxClosed(void) | Patch | |
intRadComputeList | Patch | protected |
lattice | Patch | |
lcpoType | Patch | protected |
lcpoTypeBox | Patch | protected |
lcpoTypeBoxClosed(void) | Patch | |
lcpoTypeComputeList | Patch | protected |
nChild | Patch | protected |
numAtoms | Patch | protected |
numFixedAtoms | Patch | protected |
p | Patch | protected |
p_avg | Patch | protected |
Patch(PatchID pd) | Patch | |
patchID | Patch | protected |
pExt | Patch | protected |
positionBox | Patch | protected |
positionBoxClosed(void) | Patch | |
positionComputeList | Patch | protected |
positionsReady(int n=0, int startup=1) | Patch | |
ProxyPatch(PatchID pd) | ProxyPatch | |
psiFin | Patch | protected |
psiSum | Patch | protected |
psiSumBox | Patch | protected |
psiSumBoxClosed(void) | Patch | |
psiSumComputeList | Patch | protected |
receiveAll(ProxyDataMsg *) | ProxyPatch | |
receiveData(ProxyDataMsg *) | ProxyPatch | |
receiveData(ProxyGBISP2DataMsg *) | ProxyPatch | |
receiveData(ProxyGBISP3DataMsg *) | ProxyPatch | |
registerAvgPositionPickup(Compute *cid) | Patch | |
registerBornRadPickup(Compute *cid) | Patch | |
registerDEdaSumDeposit(Compute *cid) | Patch | |
registerDHdrPrefixPickup(Compute *cid) | Patch | |
registerForceDeposit(Compute *cid) | Patch | |
registerIntRadPickup(Compute *cid) | Patch | |
registerLcpoTypePickup(Compute *cid) | Patch | |
registerPositionPickup(Compute *cid) | Patch | |
registerPsiSumDeposit(Compute *cid) | Patch | |
registerVelocityPickup(Compute *cid) | Patch | |
results | Patch | protected |
setNumFixedAtoms(int numFixed) | Patch | inline |
setSpanningTree(int, int *, int) | ProxyPatch | |
unregisterAvgPositionPickup(Compute *cid, Box< Patch, CompAtom > **const box) | Patch | |
unregisterBornRadPickup(Compute *cid, Box< Patch, Real > **const box) | Patch | |
unregisterDEdaSumDeposit(Compute *cid, Box< Patch, GBReal > **const box) | Patch | |
unregisterDHdrPrefixPickup(Compute *cid, Box< Patch, Real > **const box) | Patch | |
unregisterForceDeposit(Compute *cid, Box< Patch, Results > **const box) | Patch | |
unregisterIntRadPickup(Compute *cid, Box< Patch, Real > **const box) | Patch | |
unregisterLcpoTypePickup(Compute *cid, Box< Patch, int > **const box) | Patch | |
unregisterPositionPickup(Compute *cid, Box< Patch, CompAtom > **const box) | Patch | |
unregisterPsiSumDeposit(Compute *cid, Box< Patch, GBReal > **const box) | Patch | |
unregisterVelocityPickup(Compute *cid, Box< Patch, CompAtom > **const box) | Patch | |
v | Patch | protected |
velocityBox | Patch | protected |
velocityBoxClosed(void) | Patch | |
velocityComputeList | Patch | protected |
velocityPtrBegin | Patch | protected |
velocityPtrEnd | Patch | protected |
~Patch() | Patch | virtual |
~ProxyPatch(void) | ProxyPatch | virtual |