MigrateAtomsCombinedMsg Class Reference

#include <MigrateAtomsMsg.h>

Inheritance diagram for MigrateAtomsCombinedMsg:

Public Member Functions
	MigrateAtomsCombinedMsg (void)
	~MigrateAtomsCombinedMsg (void)
void	add (PatchID source, PatchID destination, MigrationList &m)
void	distribute (void)

Static Public Member Functions
static void *	pack (MigrateAtomsCombinedMsg *msg)
static MigrateAtomsCombinedMsg *	unpack (void *ptr)

Public Attributes
NodeID	fromNodeID
ResizeArray< PatchID >	srcPatchID
ResizeArray< PatchID >	destPatchID
ResizeArray< int >	numAtoms
int	totalAtoms
MigrationList	migrationList

Detailed Description

Definition at line 44 of file MigrateAtomsMsg.h.

Constructor & Destructor Documentation

MigrateAtomsCombinedMsg()

MigrateAtomsCombinedMsg::MigrateAtomsCombinedMsg

(

void

)

~MigrateAtomsCombinedMsg()

MigrateAtomsCombinedMsg::~MigrateAtomsCombinedMsg ( void  )

inline

Definition at line 55 of file MigrateAtomsMsg.h.

{ };

Member Function Documentation

add()

void MigrateAtomsCombinedMsg::add	(	PatchID	source,
		PatchID	destination,
		MigrationList &	m
	)

Definition at line 40 of file MigrateAtomsMsg.C.

References ResizeArray< Elem >::add(), destPatchID, migrationList, numAtoms, ResizeArray< Elem >::size(), srcPatchID, and totalAtoms.

Referenced by PatchMgr::sendMigrationMsgs().

{
  srcPatchID.add(source);
  destPatchID.add(destination);
  int n = m.size();
  numAtoms.add(n);
  totalAtoms += n;
  for ( int i = 0; i < n; ++i )
  {
    migrationList.add(m[i]);
  }
}

distribute()

void MigrateAtomsCombinedMsg::distribute

(

void

)

Definition at line 54 of file MigrateAtomsMsg.C.

References DebugM, HomePatch::depositMigration(), MigrateAtomsMsg::destPatchID, destPatchID, MigrateAtomsMsg::fromNodeID, fromNodeID, PatchMap::homePatch(), MigrateAtomsMsg::migrationList, migrationList, NAMD_bug(), numAtoms, PatchMap::Object(), ResizeArray< Elem >::resize(), ResizeArray< Elem >::size(), MigrateAtomsMsg::srcPatchID, srcPatchID, and totalAtoms.

Referenced by PatchMgr::recvMigrateAtomsCombined().

{
  int n = srcPatchID.size();
  int m = 0;
  for ( int i = 0; i < n; ++i )
  {
    MigrateAtomsMsg *msg = new MigrateAtomsMsg;
    msg->fromNodeID = fromNodeID;
    msg->srcPatchID = srcPatchID[i];
    msg->destPatchID = destPatchID[i];
    int l = numAtoms[i];
    {
      DebugM(3,"Distributing " << l << " atoms to patch " << msg->destPatchID << "\n");
      msg->migrationList.resize(l);
      for ( int j = 0; j < l; ++j ) msg->migrationList[j] = migrationList[m+j];
      m += l;
    }
    PatchMap::Object()->homePatch(msg->destPatchID)->depositMigration(msg);
  }
  if ( m != totalAtoms ) NAMD_bug("MigrateAtomsCombinedMsg::distribute bad atom count");
}

pack()

static void* MigrateAtomsCombinedMsg::pack ( MigrateAtomsCombinedMsg *  msg )

static

unpack()

static MigrateAtomsCombinedMsg* MigrateAtomsCombinedMsg::unpack ( void *  ptr )

static

Member Data Documentation

destPatchID

ResizeArray<PatchID> MigrateAtomsCombinedMsg::destPatchID

Definition at line 49 of file MigrateAtomsMsg.h.

Referenced by add(), and distribute().

fromNodeID

NodeID MigrateAtomsCombinedMsg::fromNodeID

Definition at line 47 of file MigrateAtomsMsg.h.

Referenced by distribute().

migrationList

MigrationList MigrateAtomsCombinedMsg::migrationList

Definition at line 52 of file MigrateAtomsMsg.h.

Referenced by add(), and distribute().

numAtoms

ResizeArray<int> MigrateAtomsCombinedMsg::numAtoms

Definition at line 50 of file MigrateAtomsMsg.h.

Referenced by add(), and distribute().

srcPatchID

ResizeArray<PatchID> MigrateAtomsCombinedMsg::srcPatchID

Definition at line 48 of file MigrateAtomsMsg.h.

Referenced by add(), distribute(), and PatchMgr::recvMigrateAtomsCombined().

totalAtoms

int MigrateAtomsCombinedMsg::totalAtoms

Definition at line 51 of file MigrateAtomsMsg.h.

Referenced by add(), and distribute().

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The documentation for this class was generated from the following files:

• MigrateAtomsMsg.h
• MigrateAtomsMsg.C