Class PdbReader

java.lang.Object
  |
  +--PdbReader

public class PdbReader

extends java.lang.Object

Reads in a pdb file and creates a Molecule based on the information read in

See Also:

Molecule

Constructor Summary

PdbReader()

Method Summary

static Molecule

getMolecule(java.io.InputStream istream) Creates a Molecule from reading an InputStream

Methods inherited from class java.lang.Object

clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait

Constructor Detail

PdbReader

public PdbReader()

Method Detail

getMolecule

public static Molecule getMolecule(java.io.InputStream istream)

Creates a Molecule from reading an InputStream

Parameters:

istream - an InputStream reading from a pdb file It can be from a local file, a file on the web, or an RCSB file.

Returns:

a Molecule of the pdb file