Class MolecIO

java.lang.Object
  |
  +--MolecIO

public class MolecIO

extends java.lang.Object

Contains info for input/output of Molecule data

Field Summary

static int	DTD Enumeration indicating dtd file
static int	GRO Enumeration indicating gro file
static int	PDB Enumeration indicating pdb file
static int	PSF Enumeration indicating psf file

Constructor Summary

MolecIO()

Method Summary

Molecule	LoadMolecule(java.io.InputStream istream) Loads a molecule from an InputStream
void	setReaderType(int reader) sets the reader type (pdb, psf, etc)

Methods inherited from class java.lang.Object

clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait

Field Detail

PDB

public static final int PDB

Enumeration indicating pdb file

See Also:

Constant Field Values

PSF

public static final int PSF

Enumeration indicating psf file

See Also:

Constant Field Values

DTD

public static final int DTD

Enumeration indicating dtd file

See Also:

Constant Field Values

GRO

public static final int GRO

Enumeration indicating gro file

See Also:

Constant Field Values

Constructor Detail

MolecIO

public MolecIO()

Method Detail

LoadMolecule

public Molecule LoadMolecule(java.io.InputStream istream)

Loads a molecule from an InputStream

Parameters:

istream - the InputStream to read from

setReaderType

public void setReaderType(int reader)

sets the reader type (pdb, psf, etc)

Parameters:

reader - the new reader type