VMD-L Mailing List

From: John Stone (johns_at_ks.uiuc.edu)
Date: Wed Nov 02 2005 - 14:17:44 CST

Yu,
  The morph script creates new trajectory frames when it runs.
Once you've run it, you should be able to save the structure in
these newly created frames to a file either using the File->Save Coordinates
menu item in the graphical interface, with the atom selection 'writexxx'
subcommand, or with the 'animate writexxx' subcommands.

  John Stone
  vmd_at_ks.uiuc.edu

On Wed, Nov 02, 2005 at 11:20:24AM -0500, Yu Chen wrote:
> Hi,
>
> I used the morph script in the script library and made an animation with
> two sets of pdb, going through 10 intermediate states. I was wondering if
> anyone could tell me how to save the coordinates for the intermediate
> states.
>
> Thanks for your time,
> Yu
> +-+-+-+-+-+-+-+-+-+-+-+-+-+-+-+-+-+-+-+-+-+-+-+-+-+-+-+-+-+-+-+-+-+
> Yu Chen
> Computer Analyst
> Howard Hughes Medical Institute
> at the Wadsworth Center
> P.O.Box 509, Empire State Plaza
> Albany, NY 12201-0509
> Phone: (518) 486-2102
> Fax: (518) 486-2191 

-- 
NIH Resource for Macromolecular Modeling and Bioinformatics
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