From: Kodituwakku,Dimuthu Nirmani (
Date: Wed Nov 16 2022 - 22:23:23 CST


I'm trying to calculate the projection of each carbohydrate C atom on the ring plane of TRP along the trajectory. Is there a way to achieve this through tcl scripting on VMD? distanceXY in colvars seems to be doing a similar thing, but it doesn't seem to be working for me.

Appreciate any suggestions!

Thank you!