From: Isuru Herath (
Date: Fri Dec 25 2020 - 08:23:49 CST


When I try to generate a PSF file for a protein of interest using either
AutoPSF Builder or the CHARMM-GUI, I get a file that creates a very long
bond between the two subunits. This creates problems further down the line
when trying to run a simulation. Does anyone have any suggestions for how
to handle this?

Thank you,
Isuru Herath