VMD-L Mailing List

From: omid gh (molecular.simulator_at_gmail.com)
Date: Sun Sep 06 2020 - 06:20:02 CDT

Hi all
I have ran a simulation by lammps and then I get a lammps data file by
using write data command. when I tried to view the data file by topo tool
by "topo readlammpsdata" I fined it the some molecules are out of
simulation box.
I guess they are the molecules that moved out of box during the simulation
. but I want to see all of molecules in simulation box . How can I do that?
thanks
omid.