VMD-L Mailing List

From: Mani Kandan (manikandand5110_at_gmail.com)
Date: Tue Jul 31 2018 - 06:24:53 CDT

Dear all,

                 When I am using non-standard solvant i.e SPCE water model
using solvate plugin, I got the following error:

Info) Extra structure overlap safety check...
ERROR) Found 3 water atoms near the solute! Please report this bug to
ERROR) vmd_at_ks.uiuc.edu, including, if possible, your psf and pdb file.
Solvate failed.

How can I solve this problem?

Thanks,

Manikandan D