VMD-L Mailing List

From: McGuire, Kelly (mcg05004_at_byui.edu)
Date: Thu Jul 05 2018 - 10:24:41 CDT

I am going through the membrane/protein tutorial, and after I get through the Building The Tetramer step (for my protein 5TTC, not KcsA), I open the structure in VMD and VMD thinks the 4 monomers are 4 different frames instead of 1 tetrameric structure. What would cause VMD to open my concatenated pdb file with the monomers as frames instead of a single structure?

Kelly L. McGuire

PhD Scholar

Department of Physiology and Developmental Biology

Brigham Young University

LSB 3050

Provo, UT 84602