VMD-L Mailing List

From: Devanand T (devanand.t.1986_at_gmail.com)
Date: Mon Feb 05 2018 - 09:26:40 CST

Do you want something like here? :
http://www.ks.uiuc.edu/Research/vmd/mailing_list/vmd-l/16909.html

Actually you can use topotools to replicate the molecule. But be careful to
renumber the final pdb file. HTH.

On Feb 5, 2018 8:50 PM, "Giacomo Fiorin" <giacomo.fiorin_at_gmail.com> wrote:

>
>
> On Mon, Feb 5, 2018 at 9:34 AM, thiagorrg UFC <thiagorrgarcia_at_alu.ufc.br>
> wrote:
>
>> Hello, VMD users
>>
>> I looked everywhere for this information but couldn't find it.
>>
>
> Can you list the sources that you looked? This would be useful for other
> people with a similar problem.
>
>
>> I built a 90x90 membrane patch using membuilder.org, and I want to
>> replicate this patch to form a larger membrane 180x180.
>>
>> I tried to use moveby on the original patch, saved it, but couldn't
>> combine the different patches (because of same psf I think).
>>
>> What am I missing here? Does anyone have a suggestion?
>>
>> Thank you!
>>
>
> Try this:
> http://www.ks.uiuc.edu/Research/vmd/plugins/topotools/
>
>
>
> --
> Giacomo Fiorin
> Associate Professor of Research, Temple University, Philadelphia, PA
> Contractor, National Institutes of Health, Bethesda, MD
> http://goo.gl/Q3TBQU
> https://github.com/giacomofiorin
>