From: Shahee Islam (
Date: Mon Jan 29 2018 - 00:01:25 CST

I have made coarse grained protein according to residue base coarse grained
tutorial,after that generate psf using vmd auto psf plugin.There are
disulfide bond,which i generate using patching disulfide bond.But the
problem is, the disulfide bonds are not showing in vmd.
in autopsf.log file these lines are present:
Applying patch: DISU Prot:15 Prot:278
Applying patch: DISU Prot:69 Prot:252
Applying patch: DISU Prot:147 Prot:179
Applying patch: DISU Prot:171 Prot:205