VMD-L Mailing List

From: Ashar Malik (asharjm_at_gmail.com)
Date: Wed Jul 26 2017 - 03:37:36 CDT

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On Wed, Jul 26, 2017 at 8:08 PM, Afnan Sultan <
s-afnan.sultan_at_zewailcity.edu.eg> wrote:

> Any help?!
>
> On Sat, Jul 22, 2017 at 4:51 AM, Afnan Sultan <s-afnan.sultan_at_zewailcity.
> edu.eg> wrote:
>
>> Hello VMD,
>>
>> I am facing a problem with aligning two equal sized molecules using RMSD
>> calculator.
>> The attached image shows the problem i am facing. The program reads the
>> two molecules as equally sized atoms, however, RMSD calculator is seeing
>> something else!
>> I don't know what i can do. any help?
>>
>> Thanks in advance,
>> Afnan
>>
>
> 

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/A