VMD-L Mailing List
From: Richard Wood (Richard.Wood_at_purduecal.edu)
Date: Thu Jun 16 2016 - 16:53:11 CDT
"Unable to load molecule."
From: John Stone [johns_at_ks.uiuc.edu]
Sent: Thursday, June 16, 2016 3:02 PM
To: Richard Wood
Subject: Re: vmd-l: Can't read DCD files generated using NAMD.
Does VMD emit any particular error text when you try to load
the file? It is possible that the file has been corrupted and
the DCD header or one of the timestep markers has corruption
that causes VMD to refuse to read it.
On Thu, Jun 16, 2016 at 04:12:53PM +0000, Richard Wood wrote:
> I'm running some energy minimizations using NAMD and saving the
> trajectories. Up until today, I was able to read these into VMD; as of
> this morning, I am not able to and I don't know what the problem is. I've
> not changed anything in the config file other than the names of the input
> and output files.
-- NIH Center for Macromolecular Modeling and Bioinformatics Beckman Institute for Advanced Science and Technology University of Illinois, 405 N. Mathews Ave, Urbana, IL 61801 http://www.ks.uiuc.edu/~johns/ Phone: 217-244-3349 http://www.ks.uiuc.edu/Research/vmd/