VMD-L Mailing List
From: Stefano Guglielmo (stefano.guglielmo_at_unito.it)
Date: Sun Jun 05 2016 - 04:17:51 CDT
Dear vmd users,
I am trying to generate a trr trajectory using catdcd 5.1 included in vmd
1.9.2 on a centos 7 machine; the plugin seems to encounter some problems as
it outputs a segmentation fault, but it is able to write dcd trajectories
and these trajectories are properly read by vmd. When I choose trr format
as output everything seems to go the same way with a segmentation fault and
a trajectory written, but this one is not read by vmd nor by gromacs 5.1.2.
The original dcd is 24 GB and the output trajectories are 3GB.
Do you have any suggestions?
Thanks in advance
-- Stefano GUGLIELMO PhD Assistant Professor of Medicinal Chemistry Department of Drug Science and Technology Via P. Giuria 9 10125 Turin, ITALY ph. +39 (0)11 6707678 <https://www.avast.com/sig-email?utm_medium=email&utm_source=link&utm_campaign=sig-email&utm_content=webmail> Mail priva di virus. www.avast.com <https://www.avast.com/sig-email?utm_medium=email&utm_source=link&utm_campaign=sig-email&utm_content=webmail> <#DDB4FAA8-2DD7-40BB-A1B8-4E2AA1F9FDF2>