VMD-L Mailing List
From: Xiaohui She (xshe4_at_wisc.edu)
Date: Wed Aug 12 2015 - 11:32:31 CDT
I am using 4-site water model (O, H1, H2 and Virtual site) in my simulation. When I visualize it with VMD, there are excess bonds (H-V and V-O) except the O-H bond. Is there any method to delete the excess bonds and only show the O-H bond?
Any help will be appreciated!
University of Wisconsin-Madison