VMD-L Mailing List
From: Gianluca Interlandi (gianluca_at_u.washington.edu)
Date: Sat Apr 11 2015 - 02:22:42 CDT
- Next message: oguz gurbulak: "Re: using namdstats.tcl"
- Previous message: John Stone: "Re: using namdstats.tcl"
- Next in thread: John Stone: "Re: Read CHARMM VDW radii into VMD"
- Reply: John Stone: "Re: Read CHARMM VDW radii into VMD"
- Messages sorted by: [ date ] [ thread ] [ subject ] [ author ] [ attachment ]
Dear list,
It is my understanding that VMD guesses the atoms' VDW radii based on the
atom string names. Is there a way to load the VDW radii from the parameter
files, e.g., par_all22_prot.inp? I tried loading the PSF but even that
does not contain the VDW radii.
Thanks,
Gianluca
-----------------------------------------------------
Gianluca Interlandi, PhD gianluca_at_u.washington.edu
+1 (206) 685 4435
http://artemide.bioeng.washington.edu/
Research Assistant Professor at the Department of Bioengineering
at the University of Washington, Seattle WA U.S.A.
-----------------------------------------------------
- Next message: oguz gurbulak: "Re: using namdstats.tcl"
- Previous message: John Stone: "Re: using namdstats.tcl"
- Next in thread: John Stone: "Re: Read CHARMM VDW radii into VMD"
- Reply: John Stone: "Re: Read CHARMM VDW radii into VMD"
- Messages sorted by: [ date ] [ thread ] [ subject ] [ author ] [ attachment ]