VMD-L Mailing List
From: Jérôme Hénin (jerome.henin_at_ibpc.fr)
Date: Tue Feb 24 2015 - 09:39:01 CST
There is a Gromacs tool, g_clustsize, that might do what you want.
On 24 February 2015 at 03:28, Aditya Ranganathan <aditya.sia_at_gmail.com>
> Dear All,
> I`m doing some protein aggregation related simulations using the residue
> based coarse graining approach. I was wondering if there are any scripts
> related to protein aggregation related trajectory analysis. For example, I
> want to keep track of the cluster sizes (monomer, dimers, trimers etc) with
> time. Are there any scripts for the same.
> Thanks and Regards
> Srivastav Ranganathan
> IIT Bombay