From: Mehdi Bagherpour (
Date: Wed Dec 10 2014 - 09:40:58 CST

Dear All,

I am going to find water mediated hydrogen bond between protein and DNA.
Unfortunately when I get the hydrogen bond between water-protein or
water-DNA, the address of water is not defined in VMD.
Someone know how could I find the water atoms that are interacted (by
H-Bond) between protein and DNA.

D --- W --- P ?

kind regards,