VMD-L Mailing List
From: Bennion, Brian (Bennion1_at_llnl.gov)
Date: Thu May 15 2014 - 17:48:54 CDT
You might try the clone representations found in the extensions>visualization menu.
From: owner-vmd-l_at_ks.uiuc.edu [owner-vmd-l_at_ks.uiuc.edu] on behalf of Bokas George [bokas_at_wisc.edu]
Sent: Thursday, May 15, 2014 2:48 PM
Subject: vmd-l: default representations for multiple molecules
I am attempting to create a script in order to open multiple molecules together with predefined default representations.
I think that I am close enough but I have a small problem.
When I am calling vmd from terminal I am using this command:
vmd -m traj*
So I am achieving to have about 100 different molecules imported at the vmd.
The problem is that only the first one has the predefined representation I have set at the .vmdrc file.
In particular I have added these three lines at the .vmdrc file:
color Display Background white
display projection Orthographic
mol modstyle 0 0 CPK 1.000000 0.300000 10.000000 10.000000
but only the first imported molecule appear with CPK representation.
I tried also:
mol all modstyle 0 0 CPK 1.0000000 0.300000000 10.000000 10.000000
If anyone can help me I would appreciate it a much.
Thank you very much in advance,