VMD-L Mailing List
From: Mihaela Drenscko (quo.physics_at_gmail.com)
Date: Tue Nov 26 2013 - 18:26:51 CST
When I run water on graphite simulation, my water bulk drifts towards next
cell, such that at the end of the simulation I have part of the water in
one cell and part in another.
I have to do an analysis of the trajectories and the program I use doe not
read the part of the water molecules that are in the adjacent cell.
What can I do to keep all water molecule centered in one cell, such that
my program can real all trajectories?