VMD-L Mailing List

From: John Stone (johns_at_ks.uiuc.edu)
Date: Mon Jan 03 2011 - 13:46:34 CST

Hi,
  Please work through the NAMD tutorials to become familiar with
running the program. These basic questions are covered by the tutorials
and by the various instructions available on the NAMD web site and
in the README files with the program distribution.

Cheers,
  John Stone
  vmd_at_ks.uiuc.edu

On Fri, Dec 31, 2010 at 04:34:43PM -0800, zizi moradi wrote:
> Greeting,
> I downloaded the Namd for windows and I made the necessary files in VMD
> for simulation in Namd. I opened the command prompt too.But I do not know
> how I can use my structure files and run a simulation.Can somebody do a
> favor and tell me step by step, what should I do?
> Regards,
> Zizi 

-- 
NIH Resource for Macromolecular Modeling and Bioinformatics
Beckman Institute for Advanced Science and Technology
University of Illinois, 405 N. Mathews Ave, Urbana, IL 61801
Email: johns_at_ks.uiuc.edu                 Phone: 217-244-3349
  WWW: http://www.ks.uiuc.edu/~johns/      Fax: 217-244-6078