From: Storr, Mark (
Date: Tue May 07 2002 - 13:06:43 CDT


I was wondering if it is possible to animate an MD trajectory from NAMD and
to also have displayed in a number of graph windows the total energy/vdws
etc. profiles displayed from the output file for the simulation so that one
could follow/pause the animation at 'energetically' interesting points.
If anyone has done this I would be grateful for any help with this matter,
or if not may I suggest it as a possible addition to future versions of VMD.

Many Thanks


Mark T. Storr
Postdoctoral Fellow
Steacie Institute for Molecular Sciences
National Research Council
100 Sussex Drive, Ottawa, Ontario
Canada, K1A 0R6

Tel: +1 613-998-8601
Fax: +1 613-998-7833