Re: Error while runing simulation for protein docking

From: SHOBHIT JAIN . (f20150817_at_hyderabad.bits-pilani.ac.in)
Date: Thu Oct 10 2019 - 01:38:51 CDT

No its not getting solved please can you elobrate a bit more.

On Mon, 7 Oct 2019, 20:20 Vermaas, Joshua, <Joshua.Vermaas_at_nrel.gov> wrote:

> Two things:
>
> Did you take the topology-specific information out of the file passed to
> NAMD? NAMD's parser doesn't like those lines.
>
> Do you have a blank line at the end? Sometimes these weird errors come if
> there is still input on the last line of the file.
>
> -Josh
>
>
>
> On 2019-10-06 14:08:32-06:00 owner-namd-l_at_ks.uiuc.edu wrote:
>
> Dear NAMD users
> Please can some body help me in solving the following error which i got
> while running the simulation after generating the topology and parameter
> file using CGenff programm.
> Error is :
> FATAL ERROR: BUFFER OVERRUN - buffer=** Toppar stream file generated by
> * CHARMM General Force Field (CGenFF) program version 2.2.0
> * For use with CGenFF version 4.0
> *
> Regards
> Shobhit Jain
>
>

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