From: Nirmitee Mulgaonkar (nirmitee.mulgaonkar_at_tamu.edu)
Date: Tue Jul 09 2019 - 20:23:49 CDT
I am trying to run the minimization step for my simulation in NAMD.
The log file showed the following error message:
FATAL ERROR: UNABLE TO FIND BOND PARAMETERS FOR CG2O4 CG311 (ATOMS 1220
I am using the following parameter files:
I generated the str file for my ligand from https://cgenff.paramchem.org/ using
the mol2 file from ZINC15.
I cannot find BOND PARAMETERS FOR CG2O4 CG311 in any of the parameter files
from the recently updated toppar_c36_jul18.tgz
Please let me know what can be done.
*Nirmitee Sanjay Mulgaonkar | Graduate Research Assistant*
Biological and Agricultural Engineering
Texas A&M University
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