From: soroush ziaei (soroush.ziaei7337_at_gmail.com)
Date: Tue May 21 2019 - 17:31:21 CDT
hi NAMD users,
recently, I have minimized 180000 atoms with NAMD 2.13 in 10000 steps and
some extra option that has been used is:
after that, the simulation has finished without any error in the terminal
and DCD file of MD run created...
but when I see the log file of the last part of the simulation (MD run),
some errors about rattle algorithm has appeared!
how can I understand the root of this error?
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