Question about colvars

From: Faramarz Joodaki (fjoodaki_at_my.uri.edu)
Date: Wed Jan 30 2019 - 19:06:12 CST

Hi everyone!

I am running a NPT MD simulation by NAMD. I am using Colvars to monitor
some distances and dihedral angles. Since I am just monitoring some
variables, I have not applied any restraints on those variables. I assumed
that by not mentioning restrains in Colvars input file and just defining
some variables, Colvars just monitors those variables and reports them
without applying any *default* restrains. Is it correct? I would be so
grateful if you could help me with this issue.

Best Regards,
Faramarz

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