From: Pragya Priyadarshini (pragya_at_imtech.res.in)
Date: Mon Aug 17 2015 - 04:38:29 CDT
Thank you so much for your response. Will you please suggest which NAMD
version I should download and install.
On 2015-08-17 15:02, Norman Geist wrote:
> No, you don't want to use a single node version on a infiniband connected cluster, cause you will not be able to use multiple nodes for one simulation for speedup.
> Norman Geist
> VON: owner-namd-l_at_ks.uiuc.edu [mailto:owner-namd-l_at_ks.uiuc.edu] IM AUFTRAG VON Pragya Priyadarshini
> GESENDET: Montag, 17. August 2015 09:45
> AN: namd-l_at_ks.uiuc.edu
> BETREFF: namd-l: Regarding NAMD installation
> Dear NAMD user,
> I want to install on
> Intel xeon based multi core multi node linux cluster. Each node is connected via infiband where OpenFabrics OFED is not installed.
> Will LINUX86_64-MULTICORE copy provide best results in terms of speed up and accuracy? I am confused because copy mentioned that this is for 64-BIT INTEL/AMD SINGLE NODE. Please suggest if this will work for above mentioned system configuration.
> Thanks and Best Regards
> Pragya Priyadarshini
> Junior Research Fellow
> C/o Dr. Balvinder Singh
> Bioinformatics Center (G N R P C)
> Institute of Microbial Technology-CSIR
> Sector 39A, Chandigarh-160036, INDIA
-- Pragya Priyadarshini Junior Research Fellow C/o Dr. Balvinder Singh Bioinformatics Center (G N R P C) Institute of Microbial Technology-CSIR Sector 39A, Chandigarh-160036, INDIA
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