Re: Colvar: minimal distance between 2 groups of atoms

From: Giacomo Fiorin (giacomo.fiorin_at_gmail.com)
Date: Mon Nov 17 2014 - 08:49:18 CST

Can you try distanceInv choosing the exponent that gives you the best
behavior?
On Nov 17, 2014 8:42 AM, "Vlad Cojocaru" <vlad.cojocaru_at_mpi-muenster.mpg.de>
wrote:

> Dear NAMD users,
>
> Could you please let me know if it is currently possible to define the
> minimal distance between 2 groups of atoms as a colvar component within the
> colvar module ?
>
> Thanks
>
> Best wishes
> Vlad
>
> --
> Dr. Vlad Cojocaru
> Computational Structural Biology Laboratory
> Department of Cell and Developmental Biology
> Max Planck Institute for Molecular Biomedicine
> Röntgenstrasse 20, 48149 Münster, Germany
> Tel: +49-251-70365-324; Fax: +49-251-70365-399
> Email: vlad.cojocaru[at]mpi-muenster.mpg.de
> http://www.mpi-muenster.mpg.de/research/teams/groups/rgcojocaru
>
>

This archive was generated by hypermail 2.1.6 : Wed Dec 31 2014 - 23:23:01 CST