Re: Phosphorylating a residue with Amber ff

From: vapour (senmehmet_at_gmail.com)
Date: Tue Dec 03 2013 - 17:29:31 CST

Hi Charles,

I was working on phosphorylated Ser residues back in my doctorate, and one of my colleague developed phosphorylated set/thr/tyr residues to be used in Amber force field.
pls find the reference http://www.ncbi.nlm.nih.gov/pubmed/16222554 in this web-page
All those libraries can be downloaded from the following: http://nsmn1.uh.edu/glegge/phospho_lib/

Hope I could be helpful, and best of the luck

Cheers,

Mehmet

On 30 Nov 2013, at 13:24, Charles McAnany <vmdnamd_at_charlesmcanany.com> wrote:

> ). I have the straight-chai

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