From: Tristan Croll (tristan.croll_at_qut.edu.au)
Date: Sat Jul 20 2013 - 05:15:17 CDT
You could also use the ssrestraints plugin to generate an extrabonds file.
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On 18/07/2013, at 9:30 PM, "Jérôme Hénin" <jerome.henin_at_ibpc.fr> wrote:
> You can restrain an RMSD coordinate using the collective variables module.
> ----- Original Message -----
>> How would one go about constraining the backbone conformation of a
>> peptide to a beta hairpin while still allowing the hairpin to move
>> around in solution? I want to investigate how hairpins interact with
>> other peptides.
>> Thanks for any input!
>> | Riley Workman |
>> | Duquesne University |
>> | Dept. of Chemistry and Biochemistry |
>> | 320 Mellon Hall |
>> | |
>> "If at first you don't succeed, try again with slightly different
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