Re: Flushing memory into output file

From: Nicholas M Glykos (
Date: Thu Oct 07 2010 - 14:39:25 CDT

Hi Parisa,

I shaw Axel's message, probably I'm wrong and he's right in what follows.

> I ran a simulation and it crashed.

If indeed it was the simulation that 'crashed', I should have thought that
the files would have been properly closed, with no frames missing from
the DCD file up to the last written frame. Was the simulation that crashed
or the computing machine ? If it was the computer that 'crashed' (and not
NAMD) there is very little you can do for the missing frames.


          Dr Nicholas M. Glykos, Department of Molecular Biology
     and Genetics, Democritus University of Thrace, University Campus,
  Dragana, 68100 Alexandroupolis, Greece, Tel/Fax (office) +302551030620,
    Ext.77620, Tel (lab) +302551030615,

This archive was generated by hypermail 2.1.6 : Wed Feb 29 2012 - 15:54:35 CST