Re: coarse graining

From: Anton Arkhipov (
Date: Sat Aug 07 2010 - 20:41:23 CDT


Perhaps, you are using an old version of VMD? Have you tried to
install the most up-to-date version and check for SBCG tools there?


On Aug 3, 2010, at 2:43 AM, ipsita basu wrote:

> Hi all,
> I try to run CG simulation on my all atom lipid-protein
> system. That's why I did a little search and found that vmd provides
> SBCG nethods. But I did not found the CG builder option in
> Extension-Modeling option. I go through Marrink's website too, but
> there I found the force field parameters matching gromacs. Can you
> help me to begin with CG. Thank you in advance.
> --
> Ipsita Basu
> Research Fellow
> c/o : Dr. Chaitali Mukhopadhyay
> Rajabazar Science College
> 92 APC Road
> Kolkata - 700009

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