Re: Namd. Small molecules

From: jose correa (corrjose_at_gmail.com)
Date: Fri Mar 19 2010 - 21:37:57 CDT

Dear Rivera
You need to make the ligand parameters, if you check the NAMD home, yo can
see a manual that can help you.
Best wishes
Jose Correa-Basurto
ESM-IPN, Mexico

2010/3/19 Roberto Rivera <boby55111_at_yahoo.com>

> Hello,
>
> What parameter file must be used if I want to analyse small molecules (N,
> O, S, H) like heterocycles (no proteins, no peptides, no nucleic acids)?
> Im sorry by my simple question, Im starting with Namd.
>
> Thanks in advance,
> Roberto Rivera
>
>
>
>

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