fixed atoms pdb

From: Mark M Huntress (
Date: Mon Aug 24 2009 - 17:13:20 CDT

      I just want to know, in the pdb file that specifies which atoms are fixed, (1.00 or 0.00 in the B column) there are coordinates for those atoms that are different from the initial coordinate input file i want to use. So will NAMD fix the atoms in the positions in the fix atom reference pdb file, or in the initial coordinate .coor file that I have specified in my .namd file to be the initial coordinates?

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