From: Jerome Henin (jhenin_at_cmm.chem.upenn.edu)
Date: Tue Apr 28 2009 - 11:13:38 CDT
To get 1-based indices that NAMD will understand, you can use [$A get serial].
On Tue, Apr 28, 2009 at 9:40 AM, DimitryASuplatov <genesup_at_gmail.com> wrote:
> I`ve noted that [$A get index] in vmd gives out the index sequence
> starting from 0 while pdb and psf numeration starts from 1.
> Does NAMD treat this correctly or should I apply offset manually?
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