From: Mohamed Seyam (seyam_at_colorado.edu)
Date: Mon Feb 16 2009 - 13:57:01 CST
I am trying to run an namd simulation on a double stranded DNA. I
want to find the total forces on each atom and the potential energy of
each atom throughout the simulation. I tried using the script on the
When I put this script in the config file, it gives me an error:
FATAL ERROR: couldn't open "forces.txt": too many open files
"open $filename_check "a""
(procedure "calcforces" line 4)
invoked from within
My simulation contains 8229 atoms. Also, is there any way to find the
potential energy of every atoms? I looked through the thread, but
couldn't find an answer.
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